VSEARCH

Description

VSEARCH supports de novo and reference based chimera detection, clustering, full-length and prefix dereplication, rereplication, reverse complementation, masking, all-vs-all pairwise global alignment, exact and global alignment searching, shuffling, subsampling and sorting. It also supports FASTQ file analysis, filtering, conversion and merging of paired-end reads.

More information

Availability

Module NIC5 Hercules2 Dragon2 Lemaitre3 Dragon1
VSEARCH/2.15.0-GCC-9.3.0        
VSEARCH/2.18.0-GCC-10.2.0        
VSEARCH/2.18.0-GCC-10.3.0        
VSEARCH/2.22.1-GCC-11.3.0        
VSEARCH/2.27.0-GCC-12.2.0        
VSEARCH/2.9.1-foss-2018b        
VSEARCH/2.9.1-foss-2019b