Docs

Quick start – First steps

  • Creating an account
  • Connecting to the clusters
    • How to configure your laptop to ease access to the clusters.
    • Connecting from UNIX-like environment (Linux, Mac OS X, Cygwin/MingW)
    • Connecting from Windows environment
    • Choosing and using a cluster wisely
  • Introduction to Linux
  • Copying files
  • Editing files
  • Submitting jobs with Slurm
  • Glossary

Managing files

  • Disk space
  • Transferring files to and from the clusters
  • Using the common filesystem
  • Sharing files among CÉCI users
  • Copy files and folders to the /CECI/proj partition
  • Making your files Secure
  • Making your files safe
  • Long term data storage

Using software and libraries

  • Using pre-installed software
  • Software installed in the clusters
  • Compiling and installing software from source
  • Installing software by yourself
  • Singularity Container
  • Visualization server
  • Jupyter
  • Login shell

Submitting jobs to the cluster

  • Slurm F.A.Q
  • Slurm priorities
  • An interactive job submission tool: ssubmit
  • Getting Job Efficiency
  • Slurm limits
  • Workflow management
  • Slurm interactive jobs

Software-specific documentation

  • Matlab
  • R
  • Python
CÉCI
  • Docs »
  • Connecting to the clusters

Connecting to the clusters¶

  • How to configure your laptop to ease access to the clusters.
    • If you have a Linux computer...
    • If you have a Mac...
    • If you have a Windows computer...
  • Connecting from UNIX-like environment (Linux, Mac OS X, Cygwin/MingW)
    • Clusters
    • Gateways
    • Procedure
    • Troubleshooting
    • Frequently encountered problems
  • Connecting from Windows environment
    • Setup MobaXTerm (Preferred)
    • Setup Windows Subsystem for Linux (Advanced)
  • Choosing and using a cluster wisely
    • The choice of the cluster
    • The choice of the nodes
    • The job parametrization
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