SAMtools¶
Description¶
SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.
More information¶
- Homepage: http://www.htslib.org/
Availability¶
| Module | NIC5 | Hercules2 | Dragon2 | Lemaitre3 | Dragon1 |
|---|---|---|---|---|---|
| SAMtools/1.10-GCC-8.3.0 | ✓ | ✓ | |||
| SAMtools/1.10-GCC-9.3.0 | ✓ | ||||
| SAMtools/1.11-GCC-10.2.0 | ✓ | ||||
| SAMtools/1.11-GCC-9.3.0 | ✓ | ||||
| SAMtools/1.12-GCC-10.2.0 | ✓ | ✓ | |||
| SAMtools/1.14-GCC-11.2.0 | ✓ | ||||
| SAMtools/1.16.1-GCC-11.2.0 | ✓ | ✓ | |||
| SAMtools/1.16.1-GCC-11.3.0 | ✓ | ||||
| SAMtools/1.17-GCC-12.2.0 | ✓ | ✓ | |||
| SAMtools/1.3.1-foss-2018a | ✓ | ||||
| SAMtools/1.5-foss-2016b | ✓ | ||||
| SAMtools/1.6-foss-2018a | ✓ | ||||
| SAMtools/1.9-foss-2018b | ✓ | ✓ | ✓ | ||
| SAMtools/1.9-intel-2018b | ✓ |