rnaQUAST¶
Description¶
rnaQUAST is a tool for evaluating RNA-Seq assemblies using reference genome and gene database. In addition, rnaQUAST is also capable of estimating gene database coverage by raw reads and de novo quality assessment using third-party software.
More information¶
- Homepage: http://cab.spbu.ru/software/rnaquast/
Included extensions¶
argcomplete-1.9.5, argh-0.26.2, gffutils-0.9, pyfaidx-0.5.5.2, simplejson-3.16.0
Availability¶
| Module | NIC5 | Hercules2 | Dragon2 | Lemaitre3 | Dragon1 |
|---|---|---|---|---|---|
| rnaQUAST/1.5.2-foss-2018b-Python-2.7.15 | ✓ | ✓ |