Welcome to the CECI documentation!

All technical specificities of the CECI clusters are described over there. Here, you will find all technical information needed to run jobs on them.

• First steps

  • Creating an account
  • Connecting to the clusters
  • Introduction to Linux
  • Learning by playing
  • Copying files
  • Editing files
  • Submitting jobs with Slurm
  • Glossary
  • Acknowledging the CÉCI

• Folder and Files

  • Disk space
  • Transferring files to and from the clusters
  • Using the common filesystem
  • Sharing files among CÉCI users
  • Copy files and folders to the /CECI/proj partition
  • Making your files Secure
  • Making your files safe
  • Long term data storage
  • Encrypting files

• Software and Libraries

  • Using pre-installed software
  • Compiling and installing software from source
  • Installing software by yourself
  • Singularity Container
  • Visualization server
  • Jupyter
  • Login shell
  • Software-specific documentation

• Job Submission

  • Submitting jobs with Slurm
  • Slurm F.A.Q
  • Slurm priorities
  • An interactive job submission tool: ssubmit
  • Getting Job Efficiency
  • Slurm limits
  • Workflow management
  • Slurm interactive jobs
  • Using Visual Studio Code inside a job
  • Using Ollama inside a job